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b4galnt4.S beta-1,4-N-acetyl-galactosaminyl transferase 4 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108715202, updated on 17-Aug-2024

Summary

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Official Symbol
b4galnt4.S
Official Full Name
beta-1,4-N-acetyl-galactosaminyl transferase 4 S homeolog
Primary source
Xenbase:XB-GENE-6488178
Locus tag
XELAEV_18024345mg
See related
EnsemblRapid:ENSXLAG00005006076
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See b4galnt4.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (7074072..7128534)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (6902989..6958259)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene dispanin subfamily A member 2b Neighboring gene interferon induced transmembrane protein 1 S homeolog Neighboring gene plakophilin 3 S homeolog Neighboring gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    7074072..7128534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041560886.1 → XP_041416820.1  N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8GD89, A0A974CYQ3
    Conserved Domains (2) summary
    cl08459
    Location:139 → 276
    PA14; PA14 domain
    cl11394
    Location:787 → 1100
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_018260118.2 → XP_018115607.1  N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8GD89, A0A974CYQ3
    Related
    ENSXLAP00005018171.1, ENSXLAT00005018467.1
    Conserved Domains (2) summary
    cl08459
    Location:139 → 276
    PA14; PA14 domain
    cl11394
    Location:787 → 1100
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_018260117.2 → XP_018115606.1  N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8GD89, A0A974CYQ3
    Conserved Domains (2) summary
    cl08459
    Location:139 → 276
    PA14; PA14 domain
    cl11394
    Location:787 → 1100
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_018260119.2 → XP_018115608.1  N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8GD89, A0A974CYQ3
    Related
    ENSXLAP00005018158.1, ENSXLAT00005018454.1
    Conserved Domains (2) summary
    cl08459
    Location:139 → 276
    PA14; PA14 domain
    cl11394
    Location:787 → 1100
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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