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zfta.S zinc finger translocation associated S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108715145, updated on 4-Nov-2024

Summary

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Official Symbol
zfta.S
Official Full Name
zinc finger translocation associated S homeolog
Primary source
Xenbase:XB-GENE-17341165
Locus tag
XELAEV_18024214mg
See related
EnsemblRapid:ENSXLAG00005009274 AllianceGenome:Xenbase:XB-GENE-17341165
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
c11orf95; c11orf95.S
Summary
Predicted to act upstream of or within negative regulation of DNA-templated transcription. Orthologous to human ZFTA (zinc finger translocation associated). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See zfta.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (1809546..1823058, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (1804422..1818202, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene reticulon 3 S homeolog Neighboring gene serine/threonine-protein kinase mig-15-like Neighboring gene dual specificity phosphatase 10, gene 2 S homeolog Neighboring gene provisional ortholog of Rab9 effector protein with kelch motifs S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein zfta.S

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    1809546..1823058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018260035.2 → XP_018115524.1  uncharacterized protein zfta.S

    UniProtKB/TrEMBL
    A0A1L8GDB9, A0A974HL62
    Related
    ENSXLAP00005027029.1, ENSXLAT00005027761.1
Nucleotide Protein Strain
Heading Accession and Version

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