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mgat4a.S alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108709721, updated on 18-Sep-2024

Summary

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Official Symbol
mgat4a.S
Official Full Name
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A S homeolog
Primary source
Xenbase:XB-GENE-17342666
Locus tag
XELAEV_18015548mg
See related
EnsemblRapid:ENSXLAG00005033995
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See mgat4a.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (103834150..103886084)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (94742295..94797098)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L30 S homeolog Neighboring gene CRACD like S homeolog Neighboring gene unc-50 homolog S homeolog Neighboring gene cytochrome c oxidase assembly factor 5 S homeolog Neighboring gene inositol polyphosphate-4-phosphatase type I A S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    103834150..103886084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018249799.2 → XP_018105288.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/Swiss-Prot
    Q6GQI7
    UniProtKB/TrEMBL
    A0A1L8H8S1, A0A974HWA3
    Related
    ENSXLAP00005101582.1, ENSXLAT00005103559.1

  2. XM_018249801.2 → XP_018105290.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X2

    UniProtKB/Swiss-Prot
    Q6GQI7
    UniProtKB/TrEMBL
    A0A8J0UJU2
    Related
    ENSXLAP00005101490.1, ENSXLAT00005103467.1

  3. XM_018249800.2 → XP_018105289.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/Swiss-Prot
    Q6GQI7
    UniProtKB/TrEMBL
    A0A1L8H8S1, A0A974HWA3
Nucleotide Protein Strain
Heading Accession and Version

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