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b3galt5.1.L beta-1,3-galactosyltransferase 5 gene 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108707659, updated on 17-Aug-2024

Summary

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Official Symbol
b3galt5.1.L
Official Full Name
beta-1,3-galactosyltransferase 5 gene 1 L homeolog
Primary source
Xenbase:XB-GENE-17342397
Locus tag
XELAEV_18011429mg
See related
EnsemblRapid:ENSXLAG00005031559
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See b3galt5.1.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (10974976..10987974, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (10745109..10746053, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 5-like L homeolog Neighboring gene beta-1,3-galactosyltransferase 5 gene 2 L homeolog Neighboring gene SH3 domain binding glutamate-rich protein L homeolog Neighboring gene guided entry of tail-anchored proteins factor 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    10974976..10987974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041581540.1 → XP_041437474.1  beta-1,3-galactosyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    A0A1L8HCF5, A0A974DKR0
    Conserved Domains (1) summary
    cl21608
    Location:79 → 268
    Galactosyl_T; Galactosyltransferase

  2. XM_041581541.1 → XP_041437475.1  beta-1,3-galactosyltransferase 5 isoform X2

    UniProtKB/TrEMBL
    A0A8J1M8V3
    Conserved Domains (1) summary
    cl21608
    Location:52 → 241
    Galactosyl_T; Galactosyltransferase

  3. XM_018245663.2 → XP_018101152.2  beta-1,3-galactosyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    A0A1L8HCF5, A0A974DKR0
    Related
    ENSXLAP00005094538.1, ENSXLAT00005096240.1
    Conserved Domains (1) summary
    cl21608
    Location:79 → 268
    Galactosyl_T; Galactosyltransferase

  4. XM_041581539.1 → XP_041437473.1  beta-1,3-galactosyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    A0A1L8HCF5, A0A974DKR0
    Conserved Domains (1) summary
    cl21608
    Location:79 → 268
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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