U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sorbs1.S sorbin and SH3 domain containing 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108705262, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
sorbs1.S
Official Full Name
sorbin and SH3 domain containing 1 S homeolog
Primary source
Xenbase:XB-GENE-6487058
Locus tag
XELAEV_18004504mg
See related
EnsemblRapid:ENSXLAG00005034389 AllianceGenome:Xenbase:XB-GENE-6487058
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
flaf2; r85fl; sh3d5; sorb1; sh3p12
Summary
Human ortholog(s) of this gene implicated in obesity and type 2 diabetes mellitus. Orthologous to human SORBS1 (sorbin and SH3 domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See sorbs1.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
35
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (28798030..28936770)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694875.1 (343374..482012)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene annexin A7 S homeolog Neighboring gene uncharacterized LOC121396264 Neighboring gene PDZ and LIM domain 1 S homeolog Neighboring gene traf2 and NCK-interacting protein kinase-like Neighboring gene helicase, lymphoid specific S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
sorbin and SH3 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    28798030..28936770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041571065.1 → XP_041426999.1  sorbin and SH3 domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8J1LDD5
    Conserved Domains (4) summary
    cd11919
    Location:1143 → 1197
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1217 → 1274
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:293 → 336
    Sorb; Sorbin homologous domain
    cl17036
    Location:1641 → 1698
    SH3; Src Homology 3 domain superfamily

  2. XM_041571063.1 → XP_041426997.1  sorbin and SH3 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J1LBU8
    Conserved Domains (4) summary
    cd11919
    Location:1521 → 1575
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1595 → 1652
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:2019 → 2076
    SH3; Src Homology 3 domain superfamily

  3. XM_041571064.1 → XP_041426998.1  sorbin and SH3 domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8J1LBT7
    Conserved Domains (4) summary
    cd11919
    Location:1260 → 1314
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1334 → 1391
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:410 → 453
    Sorb; Sorbin homologous domain
    cl17036
    Location:1758 → 1815
    SH3; Src Homology 3 domain superfamily

  4. XM_041571068.1 → XP_041427002.1  sorbin and SH3 domain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8J1LBV3, A0A974BRM3
    Conserved Domains (4) summary
    cd11919
    Location:983 → 1037
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1057 → 1114
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:1481 → 1538
    SH3; Src Homology 3 domain superfamily

  5. XM_041571066.1 → XP_041427000.1  sorbin and SH3 domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8J1LEA2, A0A974BRM3
    Conserved Domains (4) summary
    cd11919
    Location:1039 → 1093
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1113 → 1170
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:1537 → 1594
    SH3; Src Homology 3 domain superfamily

  6. XM_041571067.1 → XP_041427001.1  sorbin and SH3 domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8J1LBZ7, A0A974BRM3
    Conserved Domains (4) summary
    cd11919
    Location:1038 → 1092
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1112 → 1169
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:1536 → 1593
    SH3; Src Homology 3 domain superfamily

  7. XM_041571069.1 → XP_041427003.1  sorbin and SH3 domain-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A8J1LBU2, A0A974BRM3
    Conserved Domains (4) summary
    cd11919
    Location:982 → 1036
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1056 → 1113
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:1480 → 1537
    SH3; Src Homology 3 domain superfamily

  8. XM_041571070.1 → XP_041427004.1  sorbin and SH3 domain-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A8J1LDE1
    Related
    ENSXLAP00005103038.1, ENSXLAT00005105042.1
    Conserved Domains (4) summary
    cd11919
    Location:1038 → 1092
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1112 → 1169
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:1238 → 1295
    SH3; Src Homology 3 domain superfamily

  9. XM_041571071.1 → XP_041427005.1  sorbin and SH3 domain-containing protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A8J1LEA9
    Related
    ENSXLAP00005103257.1, ENSXLAT00005105262.1
    Conserved Domains (4) summary
    cd11919
    Location:1038 → 1092
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1112 → 1169
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:671 → 714
    Sorb; Sorbin homologous domain
    cl17036
    Location:1218 → 1275
    SH3; Src Homology 3 domain superfamily

  10. XM_041571072.1 → XP_041427006.1  sorbin and SH3 domain-containing protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A8J1LC02, A0A974CFL7
    Conserved Domains (4) summary
    cd11919
    Location:777 → 831
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:851 → 908
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:410 → 453
    Sorb; Sorbin homologous domain
    cl17036
    Location:1275 → 1332
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases