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chst8.S carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108704091, updated on 4-Nov-2024

Summary

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Official Symbol
chst8.S
Official Full Name
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 S homeolog
Primary source
Xenbase:XB-GENE-17339445
Locus tag
XELAEV_18001940mg
See related
EnsemblRapid:ENSXLAG00005010952 AllianceGenome:Xenbase:XB-GENE-17339445
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable sulfotransferase activity. Predicted to act upstream of or within carbohydrate biosynthetic process and proteoglycan biosynthetic process. Predicted to be located in Golgi membrane. Orthologous to human CHST8 (carbohydrate sulfotransferase 8). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See chst8.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (49769431..50062734, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694816.1 (2777411..3051296, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene LSM14A mRNA processing body assembly factor S homeolog Neighboring gene potassium channel tetramerization domain containing 15 S homeolog Neighboring gene peptidase D S homeolog Neighboring gene CCAAT enhancer binding protein alpha S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
carbohydrate sulfotransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    49769431..50062734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018240484.2 → XP_018095973.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A8J0U4L2

  2. XM_018240485.2 → XP_018095974.1  carbohydrate sulfotransferase 8 isoform X2

    UniProtKB/TrEMBL
    A0A8J0U6M2
    Related
    ENSXLAP00005032253.1, ENSXLAT00005033040.1

  3. XM_018240483.2 → XP_018095972.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A8J0U4L2
    Related
    ENSXLAP00005032269.1, ENSXLAT00005033055.1
Nucleotide Protein Strain
Heading Accession and Version

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