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chat.S choline O-acetyltransferase S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108703349, updated on 4-Nov-2024

Summary

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Official Symbol
chat.S
Official Full Name
choline O-acetyltransferase S homeolog
Primary source
Xenbase:XB-GENE-17342167
Locus tag
XELAEV_18000593mg
See related
EnsemblRapid:ENSXLAG00005018822 AllianceGenome:Xenbase:XB-GENE-17342167
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Human ortholog(s) of this gene implicated in Alzheimer's disease and congenital myasthenic syndrome 6. Orthologous to human CHAT (choline O-acetyltransferase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See chat.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (43113964..43192804)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694810.1 (4014422..4080087, complement)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene retinal G protein coupled receptor S homeolog Neighboring gene solute carrier family 18 (vesicular acetylcholine transporter), member 3 S homeolog Neighboring gene 2-oxoglutarate dehydrogenase-like, mitochondrial Neighboring gene HAUS augmin like complex subunit 7 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    43113964..43192804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041571160.1 → XP_041427094.1  choline O-acetyltransferase

    UniProtKB/TrEMBL
    A0A8J1LDM7, A0A974HBM5
    Related
    ENSXLAP00005055596.1, ENSXLAT00005056801.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases