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ppp1r3d.L protein phosphatase 1 regulatory subunit 3D L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108700936, updated on 4-Nov-2024

Summary

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Official Symbol
ppp1r3d.L
Official Full Name
protein phosphatase 1 regulatory subunit 3D L homeolog
Primary source
Xenbase:XB-GENE-17344073
Locus tag
XELAEV_18043537mg
See related
EnsemblRapid:ENSXLAG00005036110 AllianceGenome:Xenbase:XB-GENE-17344073
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to act upstream of or within regulation of glycogen biosynthetic process. Predicted to be part of protein phosphatase type 1 complex. Orthologous to human PPP1R3D (protein phosphatase 1 regulatory subunit 3D). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ppp1r3d.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (16058697..16061441)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (15988924..15991332)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene cadherin-like protein 26 Neighboring gene cadherin 26 L homeolog Neighboring gene family with sequence similarity 217 member B L homeolog Neighboring gene synaptonemal complex protein 2 L homeolog Neighboring gene phosphatase and actin regulator 3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
  
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of protein phosphatase type 1 complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 3D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    16058697..16061441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018234987.2 → XP_018090476.1  protein phosphatase 1 regulatory subunit 3D

    UniProtKB/TrEMBL
    A0A1L8ESY9, A0A974BX67
    Related
    ENSXLAP00005107966.1, ENSXLAT00005110113.1
Nucleotide Protein Strain
Heading Accession and Version

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