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fkrp.L fukutin related protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108698503, updated on 4-Nov-2024

Summary

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Official Symbol
fkrp.L
Official Full Name
fukutin related protein L homeolog
Primary source
Xenbase:XB-GENE-17338998
Locus tag
XELAEV_18039047mg
See related
EnsemblRapid:ENSXLAG00005022610 AllianceGenome:Xenbase:XB-GENE-17338998
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to act upstream of or within protein O-linked mannosylation. Predicted to be located in Golgi apparatus and membrane. Human ortholog(s) of this gene implicated in dilated cardiomyopathy and muscular dystrophy (multiple). Orthologous to human FKRP (fukutin related protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See fkrp.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (62265325..62269175, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (49078002..49081867, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 2 subunit sigma 1 L homeolog Neighboring gene solute carrier family 1 member 5 L homeolog Neighboring gene dishevelled binding antagonist of beta catenin 3 L homeolog Neighboring gene guanine nucleotide binding protein (G protein), gamma 8 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within glycoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
fukutin-related protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    62265325..62269175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041572814.1 → XP_041428748.1  fukutin-related protein

    UniProtKB/TrEMBL
    A0A1L8F835, A0A974H7G1
    Related
    ENSXLAP00005066505.1, ENSXLAT00005068028.1
    Conserved Domains (1) summary
    cl01378
    Location:324 → 361
    LicD; LicD family

  2. XM_018230039.2 → XP_018085528.1  fukutin-related protein

    UniProtKB/TrEMBL
    A0A1L8F835, A0A974H7G1
    Conserved Domains (1) summary
    cl01378
    Location:324 → 361
    LicD; LicD family

  3. XM_018230040.2 → XP_018085529.1  fukutin-related protein

    UniProtKB/TrEMBL
    A0A1L8F835, A0A974H7G1
    Conserved Domains (1) summary
    cl01378
    Location:324 → 361
    LicD; LicD family

  4. XM_018230041.2 → XP_018085530.1  fukutin-related protein

    UniProtKB/TrEMBL
    A0A1L8F835, A0A974H7G1
    Related
    ENSXLAP00005066518.1, ENSXLAT00005068042.1
    Conserved Domains (1) summary
    cl01378
    Location:324 → 361
    LicD; LicD family

  5. XM_041572815.1 → XP_041428749.1  fukutin-related protein

    UniProtKB/TrEMBL
    A0A1L8F835, A0A974H7G1
    Related
    ENSXLAP00005066492.1, ENSXLAT00005068016.1
    Conserved Domains (1) summary
    cl01378
    Location:324 → 361
    LicD; LicD family
Nucleotide Protein Strain
Heading Accession and Version

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