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abo.2.L ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108698211, updated on 18-Sep-2024

Summary

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Official Symbol
abo.2.L
Official Full Name
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 2 L homeolog
Primary source
Xenbase:XB-GENE-6488967
Locus tag
XELAEV_18038377mg
See related
EnsemblRapid:ENSXLAG00005020372
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See abo.2.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (7011343..7047378)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (6888442..6924413)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase L homeolog Neighboring gene surfeit 6 L homeolog Neighboring gene histo-blood group ABO system transferase-like Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 4 L homeolog Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vesicle IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
histo-blood group ABO system transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    7011343..7047378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018229525.2 → XP_018085014.1  histo-blood group ABO system transferase isoform X1

    UniProtKB/TrEMBL
    A0A1L8F696, A0A974C732
    Related
    ENSXLAP00005059646.1, ENSXLAT00005061095.1
    Conserved Domains (1) summary
    cl11394
    Location:77 → 365
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_041572390.1 → XP_041428324.1  histo-blood group ABO system transferase isoform X1

    UniProtKB/TrEMBL
    A0A1L8F696, A0A974C732
    Related
    ENSXLAP00005059635.1, ENSXLAT00005061085.1
    Conserved Domains (1) summary
    cl11394
    Location:77 → 365
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_041572391.1 → XP_041428325.1  histo-blood group ABO system transferase isoform X2

    UniProtKB/TrEMBL
    A0A8J1LI35
    Conserved Domains (1) summary
    cd02515
    Location:76 → 346
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein Strain
Heading Accession and Version

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