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gys1.S glycogen synthase 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108697802, updated on 4-Nov-2024

Summary

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Official Symbol
gys1.S
Official Full Name
glycogen synthase 1 S homeolog
Primary source
Xenbase:XB-GENE-17341253
Locus tag
XELAEV_18037845mg
See related
EnsemblRapid:ENSXLAG00005011840 AllianceGenome:Xenbase:XB-GENE-17341253
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gsy; gys
Summary
Human ortholog(s) of this gene implicated in cardiovascular system disease. Orthologous to human GYS1 (glycogen synthase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See gys1.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (99222703..99254892, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (80090616..80122875, complement)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene Ferritin light chain, oocyte isoform Neighboring gene circularly permutated Ras protein 1 Neighboring gene uncharacterized LOC108697801 Neighboring gene RuvB like AAA ATPase 2 S homeolog Neighboring gene lutropin subunit beta-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glycogen [starch] synthase, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    99222703..99254892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041571613.1 → XP_041427547.1  glycogen [starch] synthase, muscle isoform X1

    UniProtKB/TrEMBL
    A0A8J1LDN1, A0A974CE27
    Conserved Domains (1) summary
    cd03793
    Location:26 → 615
    GT3_GSY2-like; glycogen synthase GSY2 and similar proteins

  2. XM_041571614.1 → XP_041427548.1  glycogen [starch] synthase, muscle isoform X2

    UniProtKB/TrEMBL
    A0A8J1LDB4, A0A974CE27
    Conserved Domains (1) summary
    cd03793
    Location:26 → 615
    GT3_GSY2-like; glycogen synthase GSY2 and similar proteins

  3. XM_041571612.1 → XP_041427546.1  glycogen [starch] synthase, muscle isoform X1

    UniProtKB/TrEMBL
    A0A8J1LDN1, A0A974CE27
    Related
    ENSXLAP00005034614.1, ENSXLAT00005035497.1
    Conserved Domains (1) summary
    cd03793
    Location:26 → 615
    GT3_GSY2-like; glycogen synthase GSY2 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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