U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108678358 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Hyalella azteca ]

Gene ID: 108678358, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108678358
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
Locus tag
HAZT_HAZT010801
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyalella azteca
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Peracarida; Amphipoda; Senticaudata; Talitrida; Talitroidea; Hyalellidae; Hyalella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108678358 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Hazt_2.0.2 (GCF_000764305.2) Unplaced Scaffold NW_025933876.1 (192314..206414)
100 previous assembly Hazt_2.0 (GCF_000764305.1) Unplaced Scaffold NW_017248418.1 (192315..206399)

NW_025933876.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108678364 Neighboring gene uncharacterized LOC125177621 Neighboring gene uncharacterized LOC108678362

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Hyalella azteca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hazt_2.0.2 Primary Assembly

Genomic

  1. NW_025933876.1 Reference Hazt_2.0.2 Primary Assembly

    Range
    192314..206414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018166760.2 → XP_018022249.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A6A0H9I2, A0A8B7P7V5

  2. XM_018166761.2 → XP_018022250.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A6A0H9I2, A0A8B7P8E7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases