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LOC108669553 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Hyalella azteca ]

Gene ID: 108669553, updated on 30-Nov-2023

Summary

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Gene symbol
LOC108669553
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyalella azteca
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Peracarida; Amphipoda; Senticaudata; Talitrida; Talitroidea; Hyalellidae; Hyalella
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Genomic context

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See LOC108669553 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Hazt_2.0.2 (GCF_000764305.2) Unplaced Scaffold NW_025947068.1 (33981..36851, complement)
100 previous assembly Hazt_2.0 (GCF_000764305.1) Unplaced Scaffold NW_017244389.1 (21639..37898, complement)

NW_025947068.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108669555 Neighboring gene uncharacterized LOC125179408 Neighboring gene uncharacterized LOC125179407 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyalella azteca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hazt_2.0.2 Primary Assembly

Genomic

  1. NW_025947068.1 Reference Hazt_2.0.2 Primary Assembly

    Range
    33981..36851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047885199.1 → XP_047741155.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A979FXW9
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases