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LOC108665541 alpha,alpha-trehalose-phosphate synthase [UDP-forming] [ Hyalella azteca ]

Gene ID: 108665541, updated on 30-Nov-2023

Summary

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Gene symbol
LOC108665541
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Locus tag
HAZT_HAZT006089
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyalella azteca
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Peracarida; Amphipoda; Senticaudata; Talitrida; Talitroidea; Hyalellidae; Hyalella
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Genomic context

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See LOC108665541 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Hazt_2.0.2 (GCF_000764305.2) Unplaced Scaffold NW_025938085.1 (34286..42464)
100 previous assembly Hazt_2.0 (GCF_000764305.1) Unplaced Scaffold NW_017239361.1 (34287..42465)

NW_025938085.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108665539 Neighboring gene alpha,alpha-trehalose-phosphate synthase [UDP-forming]-like Neighboring gene alpha,alpha-trehalose-phosphate synthase [UDP-forming]-like Neighboring gene sodium- and chloride-dependent glycine transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyalella azteca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hazt_2.0.2 Primary Assembly

Genomic

  1. NW_025938085.1 Reference Hazt_2.0.2 Primary Assembly

    Range
    34286..42464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018152306.2 → XP_018007795.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming]

    UniProtKB/TrEMBL
    A0A6A0H3L5, A0A8B7N2J1
Nucleotide Protein
Heading Accession and Version

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