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LOC108654292 aspartyl/asparaginyl beta-hydroxylase [ Drosophila navojoa ]

Gene ID: 108654292, updated on 10-May-2024

Summary

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Gene symbol
LOC108654292
Gene description
aspartyl/asparaginyl beta-hydroxylase
Locus tag
AWZ03_006482
See related
EnsemblRapid:LOC108654292
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila navojoa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Orthologs
fruit fly all
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Genomic context

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See LOC108654292 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current UFRJ_Dnav_4.2 (GCF_001654015.2) Unplaced Scaffold NW_022045908.1 (161850..169827)
100 previous assembly ASM165401v1 (GCF_001654015.1) 5 Unlocalized Scaffold NW_017181431.1 (10056732..10064704, complement)

NW_022045908.1Genomic Context describing neighboring genes Neighboring gene ras-like GTP-binding protein Rho1 Neighboring gene Ras-related protein interacting with calmodulin Neighboring gene uncharacterized LOC108652754 Neighboring gene esterase-5A-like Neighboring gene uncharacterized LOC108653857

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase; probable serine/threonine-protein kinase kinX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila navojoa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UFRJ_Dnav_4.2

Genomic

  1. NW_022045908.1 Reference UFRJ_Dnav_4.2

    Range
    161850..169827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030384358.1 → XP_030240218.1  probable serine/threonine-protein kinase kinX isoform X7

    UniProtKB/TrEMBL
    A0A484BGW7
    Related
    XP_030240218.1, XM_030384358.1

  2. XM_030384359.1 → XP_030240219.1  probable serine/threonine-protein kinase kinX isoform X8

    UniProtKB/TrEMBL
    A0A484BGW7
    Related
    XP_030240219.1, XM_030384359.1

  3. XM_030384357.1 → XP_030240217.1  probable serine/threonine-protein kinase kinX isoform X6

    UniProtKB/TrEMBL
    A0A484BGW7
    Related
    XP_030240217.1, XM_030384357.1

  4. XM_030384356.1 → XP_030240216.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

    Related
    XP_030240216.1, XM_030384356.1
    Conserved Domains (3) summary
    COG0457
    Location:596 → 829
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:675 → 703
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:814 → 968
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  5. XM_030384354.1 → XP_030240214.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

    Related
    XP_030240214.1, XM_030384354.1
    Conserved Domains (3) summary
    COG0457
    Location:668 → 901
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:747 → 775
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:886 → 1040
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  6. XM_018105471.2 → XP_017960960.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    Related
    XP_017960960.1, XM_018105471.2
    Conserved Domains (3) summary
    COG0457
    Location:655 → 901
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:734 → 762
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:873 → 1027
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  7. XM_030384355.1 → XP_030240215.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

    Related
    XP_030240215.1, XM_030384355.1
    Conserved Domains (3) summary
    COG0457
    Location:650 → 883
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:729 → 757
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:868 → 1022
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  8. XM_018105474.2 → XP_017960963.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

    Related
    XP_017960963.1, XM_018105474.2
    Conserved Domains (3) summary
    COG0457
    Location:432 → 678
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:511 → 539
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:650 → 804
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
Nucleotide Protein
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