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LOC108648851 oocyte zinc finger protein XlCOF6-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 108648851, updated on 4-Nov-2024

Summary

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Official Symbol
LOC108648851provided by Xenbase
Official Full Name
oocyte zinc finger protein XlCOF6-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29091291
See related
AllianceGenome:Xenbase:XB-GENE-29091291
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC108648851 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (4622965..4626017, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (754758..759806, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF66.1-like Neighboring gene uncharacterized LOC108648780 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
oocyte zinc finger protein XlCOF6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    4622965..4626017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018097392.2 → XP_017952881.2  oocyte zinc finger protein XlCOF6-like

    UniProtKB/TrEMBL
    A0A8J0SWW4
    Conserved Domains (3) summary
    COG5048
    Location:136 → 541
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:612 → 667
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:168 → 188
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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