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LOC108644767 oocyte zinc finger protein XlCOF7.1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 108644767, updated on 17-Aug-2024

Summary

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Official Symbol
LOC108644767provided by Xenbase
Official Full Name
oocyte zinc finger protein XlCOF7.1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29090211
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC108644767 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (3146767..3151098, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683395.1 (516294..523082)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene oocyte zinc finger protein XlCOF7.1 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene H2A clustered histone 14 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene ZFP2 zinc finger protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
oocyte zinc finger protein XlCOF7.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3146767..3151098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031893040.1 → XP_031748900.1  oocyte zinc finger protein XlCOF7.1-like

    UniProtKB/TrEMBL
    A0A8J1IVW9
    Conserved Domains (4) summary
    COG5048
    Location:262 → 445
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:342 → 362
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:508 → 530
    zf-C2H2; Zinc finger, C2H2 type
    cl02581
    Location:88 → 113
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein Strain
Heading Accession and Version

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