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LOC108631958 zeta-sarcoglycan [ Ceratina calcarata ]

Gene ID: 108631958, updated on 1-Aug-2024

Summary

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Gene symbol
LOC108631958
Gene description
zeta-sarcoglycan
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratina calcarata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Ceratina; Zadontomerus
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM165200v1 (GCF_001652005.1) Unplaced Scaffold NW_017135881.1 (615937..791536)

NW_017135881.1Genomic Context describing neighboring genes Neighboring gene proton channel OtopLc-like Neighboring gene uncharacterized LOC113465161 Neighboring gene uncharacterized LOC108631686 Neighboring gene vacuolar protein sorting 36

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017135881 Unplaced Scaffold Reference ASM165200v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratina calcarata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM165200v1

Genomic

  1. NW_017135881.1 Reference ASM165200v1

    Range
    615937..791536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026819155.1 → XP_026674956.1  zeta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0AAJ7SBC4
    Conserved Domains (1) summary
    pfam04790
    Location:134 → 410
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_026819157.1 → XP_026674958.1  zeta-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0AAJ7SBB8
    Conserved Domains (1) summary
    pfam04790
    Location:131 → 407
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_018036242.2 → XP_017891731.1  zeta-sarcoglycan isoform X4

    UniProtKB/TrEMBL
    A0AAJ7JFS3

  4. XM_018036239.2 → XP_017891728.1  zeta-sarcoglycan isoform X3

    UniProtKB/TrEMBL
    A0AAJ7JFK8
Nucleotide Protein
Heading Accession and Version

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