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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Ceratina calcarata ]

Gene ID: 108629747, updated on 10-Oct-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratina calcarata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Ceratina; Zadontomerus
Orthologs
fruit fly honey bee all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM165200v1 (GCF_001652005.1) Unplaced Scaffold NW_017177087.1 (169434..174905)

NW_017177087.1Genomic Context describing neighboring genes Neighboring gene Crk proto-oncogene, adaptor protein Neighboring gene AMP-activated protein kinase alpha subunit Neighboring gene leucine-rich repeat-containing protein 15-like Neighboring gene GDP-mannose pyrophosphorylase A Neighboring gene uncharacterized LOC108629737

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017177087 Unplaced Scaffold Reference ASM165200v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
congested-like trachea protein; mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratina calcarata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM165200v1

Genomic

  1. NW_017177087.1 Reference ASM165200v1

    Range
    169434..174905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018032584.2 → XP_017888073.1  congested-like trachea protein isoform X1

    UniProtKB/TrEMBL
    A0AAJ7JAI8

  2. XM_026817574.1 → XP_026673375.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    UniProtKB/TrEMBL
    A0AAJ7WFE1
    Conserved Domains (2) summary
    pfam00153
    Location:66 → 159
    Mito_carr; Mitochondrial carrier protein
    cl28162
    Location:12 → 61
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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