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LOC108559683 zeta-sarcoglycan [ Nicrophorus vespilloides ]

Gene ID: 108559683, updated on 10-May-2024

Summary

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Gene symbol
LOC108559683
Gene description
zeta-sarcoglycan
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicrophorus vespilloides
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Staphyliniformia; Silphidae; Nicrophorinae; Nicrophorus
Orthologs
fruit fly all
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Genomic context

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See LOC108559683 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Nicve_v1.0 (GCF_001412225.1) Unplaced Scaffold NW_017097303.1 (32780..50234)

NW_017097303.1Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein Nup58 Neighboring gene protein FAM114A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017097303.1 Unplaced Scaffold Reference Nicve_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicrophorus vespilloides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nicve_v1.0

Genomic

  1. NW_017097303.1 Reference Nicve_v1.0

    Range
    32780..50234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017917029.1 → XP_017772518.1  zeta-sarcoglycan

  2. XM_017917028.1 → XP_017772517.1  zeta-sarcoglycan

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases