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CLEC10A C-type lectin domain containing 10A [ Rhinopithecus bieti (black snub-nosed monkey) ]

Gene ID: 108514293, updated on 1-Aug-2024

Summary

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Gene symbol
CLEC10A
Gene description
C-type lectin domain containing 10A
See related
Ensembl:ENSRBIG00000034862
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus bieti
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human all
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Genomic context

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See CLEC10A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM169854v1 (GCF_001698545.1) Unplaced Scaffold NW_016814433.1 (2511801..2518300, complement)

NW_016814433.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 11 Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP3-like Neighboring gene asialoglycoprotein receptor 2 Neighboring gene asialoglycoprotein receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016814433.1 Unplaced Scaffold Reference ASM169854v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 10 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus bieti Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM169854v1 Primary Assembly

Genomic

  1. NW_016814433.1 Reference ASM169854v1 Primary Assembly

    Range
    2511801..2518300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017850386.1 → XP_017705875.1  C-type lectin domain family 10 member A isoform X3

    UniProtKB/TrEMBL
    A0A2K6LE99, A0A2K6LEA3, A0AAJ7DHK5
    Conserved Domains (2) summary
    cd03590
    Location:154 → 278
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:16 → 143
    Lectin_N; Hepatic lectin, N-terminal domain

  2. XM_017850385.1 → XP_017705874.1  C-type lectin domain family 10 member A isoform X2

    UniProtKB/TrEMBL
    A0A2K6LE99, A0AAJ7DHK8
    Conserved Domains (2) summary
    cd03590
    Location:157 → 281
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:18 → 143
    Lectin_N; Hepatic lectin, N-terminal domain

  3. XM_017850384.1 → XP_017705873.1  C-type lectin domain family 10 member A isoform X1

    UniProtKB/TrEMBL
    A0A2K6LE89, A0A2K6LE99, A0AAJ7DHJ8
    Related
    ENSRBIP00000021826.1, ENSRBIT00000045712.1

  4. XM_017850389.1 → XP_017705878.1  C-type lectin domain family 10 member A isoform X5

    UniProtKB/TrEMBL
    A0A2K6LE99, A0AAJ7DI46
    Conserved Domains (2) summary
    cd03590
    Location:115 → 239
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:24 → 104
    Lectin_N; Hepatic lectin, N-terminal domain

  5. XM_017850387.1 → XP_017705876.1  C-type lectin domain family 10 member A isoform X3

    UniProtKB/TrEMBL
    A0A2K6LE99, A0A2K6LEA3, A0AAJ7DHK5
    Related
    ENSRBIP00000021832.1, ENSRBIT00000045718.1
    Conserved Domains (2) summary
    cd03590
    Location:154 → 278
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:16 → 143
    Lectin_N; Hepatic lectin, N-terminal domain

  6. XM_017850388.1 → XP_017705877.1  C-type lectin domain family 10 member A isoform X4

    UniProtKB/TrEMBL
    A0A2K6LE99, A0AAJ7DHJ1
    Conserved Domains (2) summary
    cd03590
    Location:154 → 274
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:16 → 143
    Lectin_N; Hepatic lectin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

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