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LOC108489431 callose synthase 5-like [ Gossypium arboreum ]

Gene ID: 108489431, updated on 6-Jun-2024

Summary

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Gene symbol
LOC108489431
Gene description
callose synthase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108489431 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
44
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 10 NC_069079.1 (24621817..24638322)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 9 NC_030672.1 (95879215..95895525)

Chromosome 10 - NC_069079.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene NAD(P)H-quinone oxidoreductase subunit O, chloroplastic Neighboring gene small nucleolar RNA J33 Neighboring gene uncharacterized LOC108488335 Neighboring gene uncharacterized LOC108489145

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: callose synthase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069079.1 Reference ASM2569848v2 Primary Assembly

    Range
    24621817..24638322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053019796.1 → XP_052875756.1  LOW QUALITY PROTEIN: callose synthase 5-like

    UniProtKB/TrEMBL
    A0A0B0P9B7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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