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LOC108483106 rhamnogalacturonan I rhamnosyltransferase 1 [ Gossypium arboreum ]

Gene ID: 108483106, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108483106
Gene description
rhamnogalacturonan I rhamnosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108483106 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 3 NC_069072.1 (45610053..45614738)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 7 NC_030670.1 (51493744..51497624)

Chromosome 3 - NC_069072.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108482651 Neighboring gene integrin-linked protein kinase 1 Neighboring gene fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic Neighboring gene phosphate transporter PHO1 homolog 3-like Neighboring gene NAC domain-containing protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069072.1 Reference ASM2569848v2 Primary Assembly

    Range
    45610053..45614738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017786318.2 → XP_017641807.1  rhamnogalacturonan I rhamnosyltransferase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases