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LOC108482723 callose synthase 10 [ Gossypium arboreum ]

Gene ID: 108482723, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108482723
Gene description
callose synthase 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108482723 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
51
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 1 NC_069070.1 (16266672..16295526)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 7 NC_030670.1 (17239826..17268752, complement)

Chromosome 1 - NC_069070.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC108481143 Neighboring gene lysine-specific demethylase REF6-like Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069070.1 Reference ASM2569848v2 Primary Assembly

    Range
    16266672..16295526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017785841.2 → XP_017641330.1  callose synthase 10

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases