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LOC108476977 beta-amylase 3, chloroplastic [ Gossypium arboreum ]

Gene ID: 108476977, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108476977
Gene description
beta-amylase 3, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108476977 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 12 NC_069081.1 (113914879..113917527)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 6 NC_030669.1 (73769208..73772011)

Chromosome 12 - NC_069081.1Genomic Context describing neighboring genes Neighboring gene FCS-Like Zinc finger 2 Neighboring gene uncharacterized LOC108476787 Neighboring gene probable serine/threonine-protein kinase PBL19 Neighboring gene uncharacterized LOC108478218

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 3, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069081.1 Reference ASM2569848v2 Primary Assembly

    Range
    113914879..113917527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017779372.2 → XP_017634861.1  beta-amylase 3, chloroplastic isoform X2

  2. XM_017779371.2 → XP_017634860.1  beta-amylase 3, chloroplastic isoform X1

    UniProtKB/TrEMBL
    A0A0B0PQF4
    Conserved Domains (1) summary
    PLN02803
    Location:1 → 540
    PLN02803; beta-amylase
Nucleotide Protein
Heading Accession and Version

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