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LOC108476579 probable galacturonosyltransferase 9 [ Gossypium arboreum ]

Gene ID: 108476579, updated on 10-Oct-2024

Summary

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Gene symbol
LOC108476579
Gene description
probable galacturonosyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108476579 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 12 NC_069081.1 (13336571..13344262)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 6 NC_030669.1 (78008501..78016135, complement)

Chromosome 12 - NC_069081.1Genomic Context describing neighboring genes Neighboring gene WPP domain-interacting tail-anchored protein 1 Neighboring gene pentatricopeptide repeat-containing protein At3g02330, mitochondrial Neighboring gene small nucleolar RNA R71 Neighboring gene zinc finger protein CONSTANS-LIKE 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069081.1 Reference ASM2569848v2 Primary Assembly

    Range
    13336571..13344262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017778820.2 → XP_017634309.1  probable galacturonosyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A0B0PT87

  2. XM_053023589.1 → XP_052879549.1  probable galacturonosyltransferase 9 isoform X2

  3. XM_017778823.2 → XP_017634312.1  probable galacturonosyltransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A0B0PT87

  4. XM_017778822.2 → XP_017634311.1  probable galacturonosyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A0B0PT87

  5. XM_053023590.1 → XP_052879550.1  probable galacturonosyltransferase 9 isoform X4

Nucleotide Protein
Heading Accession and Version

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