U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108476303 probable xyloglucan galactosyltransferase GT17 [ Gossypium arboreum ]

Gene ID: 108476303, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108476303
Gene description
probable xyloglucan galactosyltransferase GT17
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108476303 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 3 NC_069072.1 (145443..147338, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 5 NC_030668.1 (42215388..42217269, complement)

Chromosome 3 - NC_069072.1Genomic Context describing neighboring genes Neighboring gene cation-chloride cotransporter 1-like Neighboring gene cationic amino acid transporter 1-like Neighboring gene cytochrome c Neighboring gene FT-interacting protein 3-like Neighboring gene uncharacterized LOC108476204

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable xyloglucan galactosyltransferase GT17

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069072.1 Reference ASM2569848v2 Primary Assembly

    Range
    145443..147338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017778477.2 → XP_017633966.1  probable xyloglucan galactosyltransferase GT17

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases