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LOC108470533 beta-amylase 2, chloroplastic [ Gossypium arboreum ]

Gene ID: 108470533, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108470533
Gene description
beta-amylase 2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108470533 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 11 NC_069080.1 (8378787..8382867, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 4 NC_030667.1 (24729422..24733401)

Chromosome 11 - NC_069080.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA hydrolase 2 Neighboring gene beta-amylase 7-like Neighboring gene transcription factor MYC1 Neighboring gene rop guanine nucleotide exchange factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069080.1 Reference ASM2569848v2 Primary Assembly

    Range
    8378787..8382867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017771878.2 → XP_017627367.1  beta-amylase 2, chloroplastic

    UniProtKB/TrEMBL
    A0A0B0P3X7
    Conserved Domains (1) summary
    cl07893
    Location:97 → 528
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases