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LOC108467400 xyloglucan 6-xylosyltransferase 2 [ Gossypium arboreum ]

Gene ID: 108467400, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108467400
Gene description
xyloglucan 6-xylosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108467400 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 8 NC_069077.1 (136066755..136068833, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 3 NC_030666.1 (55496074..55498109)

Chromosome 8 - NC_069077.1Genomic Context describing neighboring genes Neighboring gene ferritin-like catalase Nec2 Neighboring gene rapid alkalinization factor-like Neighboring gene xyloglucan 6-xylosyltransferase 2-like Neighboring gene thiamine pyrophosphokinase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan 6-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan 6-xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069077.1 Reference ASM2569848v2 Primary Assembly

    Range
    136066755..136068833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017767999.2 → XP_017623488.1  xyloglucan 6-xylosyltransferase 2

    UniProtKB/TrEMBL
    A0A0B0PPJ8
Nucleotide Protein
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