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LOC108464363 probable galacturonosyltransferase 12 [ Gossypium arboreum ]

Gene ID: 108464363, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108464363
Gene description
probable galacturonosyltransferase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108464363 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 13 NC_069082.1 (112141279..112144705)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 13 NC_030676.1 (116543079..116548241, complement)

Chromosome 13 - NC_069082.1Genomic Context describing neighboring genes Neighboring gene protein CHLORORESPIRATORY REDUCTION 41, chloroplastic Neighboring gene polycomb group protein FIE1 Neighboring gene transcription factor ILR3 Neighboring gene photosynthetic NDH subunit of lumenal location 3, chloroplastic Neighboring gene 21.7 kDa class VI heat shock protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069082.1 Reference ASM2569848v2 Primary Assembly

    Range
    112141279..112144705
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017764637.2 → XP_017620126.2  probable galacturonosyltransferase 12

Nucleotide Protein
Heading Accession and Version

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