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LOC108461816 pectin acetylesterase 12-like [ Gossypium arboreum ]

Gene ID: 108461816, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108461816
Gene description
pectin acetylesterase 12-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108461816 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 13 NC_069082.1 (95200969..95204760, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 13 NC_030676.1 (53626141..53629936, complement)

Chromosome 13 - NC_069082.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g40410, mitochondrial-like Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene flap endonuclease 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectin acetylesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectin acetylesterase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069082.1 Reference ASM2569848v2 Primary Assembly

    Range
    95200969..95204760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017761761.2 → XP_017617250.1  pectin acetylesterase 12-like

    UniProtKB/TrEMBL
    A0A0B0PI98
    Conserved Domains (1) summary
    pfam03283
    Location:43 → 392
    PAE; Pectinacetylesterase
Nucleotide Protein
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