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LOC108460735 probable galacturonosyltransferase 13 [ Gossypium arboreum ]

Gene ID: 108460735, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108460735
Gene description
probable galacturonosyltransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108460735 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 4 NC_069073.1 (8594315..8600587)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 12 NC_030675.1 (118164950..118170999, complement)

Chromosome 4 - NC_069073.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108458414 Neighboring gene uncharacterized LOC108459609 Neighboring gene membrane-anchored ubiquitin-fold protein 1-like Neighboring gene chaperone protein ClpB3, chloroplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069073.1 Reference ASM2569848v2 Primary Assembly

    Range
    8594315..8600587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017760353.2 → XP_017615842.1  probable galacturonosyltransferase 13 isoform X1

    UniProtKB/TrEMBL
    A0A0B0MVJ7
    Conserved Domains (2) summary
    cd06429
    Location:208 → 520
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02870
    Location:1 → 533
    PLN02870; Probable galacturonosyltransferase

  2. XM_017760354.2 → XP_017615843.1  probable galacturonosyltransferase 13 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases