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LOC108460615 probable UDP-arabinopyranose mutase 2 [ Gossypium arboreum ]

Gene ID: 108460615, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108460615
Gene description
probable UDP-arabinopyranose mutase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108460615 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 11 NC_069080.1 (3271510..3273585)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 2 NC_030665.1 (39381456..39383560)

Chromosome 11 - NC_069080.1Genomic Context describing neighboring genes Neighboring gene nuclear transport factor 2-like Neighboring gene uncharacterized LOC108467055 Neighboring gene uncharacterized LOC108466762 Neighboring gene hexosyltransferase GAUT11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069080.1 Reference ASM2569848v2 Primary Assembly

    Range
    3271510..3273585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017760179.2 → XP_017615668.1  probable UDP-arabinopyranose mutase 2

    UniProtKB/TrEMBL
    A0A0B0M9J5, A0A0B0P351
    Conserved Domains (1) summary
    PLN03180
    Location:5 → 349
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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