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LOC108460268 glucan endo-1,3-beta-glucosidase 6-like [ Gossypium arboreum ]

Gene ID: 108460268, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108460268
Gene description
glucan endo-1,3-beta-glucosidase 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108460268 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 4 NC_069073.1 (1134862..1140957)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 12 NC_030675.1 (94351251..94355959, complement)

Chromosome 4 - NC_069073.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene probable inactive purple acid phosphatase 28 Neighboring gene flavonoid 3-O-glucosyltransferase-like Neighboring gene flavonoid 3-O-glucosyltransferase-like Neighboring gene flavonoid 3-O-glucosyltransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan endo-1,3-beta-glucosidase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069073.1 Reference ASM2569848v2 Primary Assembly

    Range
    1134862..1140957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017759706.2 → XP_017615195.1  glucan endo-1,3-beta-glucosidase 6-like

    UniProtKB/TrEMBL
    A0A0B0PYY5
    Conserved Domains (2) summary
    smart00768
    Location:366 → 452
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:27 → 345
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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