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LOC108458235 starch synthase 1, chloroplastic/amyloplastic-like [ Gossypium arboreum ]

Gene ID: 108458235, updated on 18-Sep-2024

Summary

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Gene symbol
LOC108458235
Gene description
starch synthase 1, chloroplastic/amyloplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108458235 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 4 NC_069073.1 (394223..401598, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 12 NC_030675.1 (137176468..137183722, complement)

Chromosome 4 - NC_069073.1Genomic Context describing neighboring genes Neighboring gene protein JINGUBANG Neighboring gene PP2A regulatory subunit TAP46-like Neighboring gene uncharacterized LOC128291862 Neighboring gene uncharacterized LOC108460709

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 1, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069073.1 Reference ASM2569848v2 Primary Assembly

    Range
    394223..401598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017757548.2 → XP_017613037.1  starch synthase 1, chloroplastic/amyloplastic-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases