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LOC108457359 hydroxyproline O-galactosyltransferase HPGT1 [ Gossypium arboreum ]

Gene ID: 108457359, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108457359
Gene description
hydroxyproline O-galactosyltransferase HPGT1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108457359 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 11 NC_069080.1 (1348439..1352092)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 11 NC_030674.1 (21735033..21738629)

Chromosome 11 - NC_069080.1Genomic Context describing neighboring genes Neighboring gene ABC transporter C family member 10-like Neighboring gene uncharacterized mitochondrial protein AtMg00310-like Neighboring gene uncharacterized LOC108457360 Neighboring gene ubiquitin-conjugating enzyme E2 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069080.1 Reference ASM2569848v2 Primary Assembly

    Range
    1348439..1352092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017756377.2 → XP_017611866.1  hydroxyproline O-galactosyltransferase HPGT1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases