U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108456754 cysteine synthase, chloroplastic/chromoplastic-like [ Gossypium arboreum ]

Gene ID: 108456754, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108456754
Gene description
cysteine synthase, chloroplastic/chromoplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108456754 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 9 NC_069078.1 (85977447..85982456, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 11 NC_030674.1 (35531224..35536176, complement)

Chromosome 9 - NC_069078.1Genomic Context describing neighboring genes Neighboring gene shewanella-like protein phosphatase 2 Neighboring gene uncharacterized LOC108456755 Neighboring gene uncharacterized LOC108455725 Neighboring gene heat shock 70 kDa protein 6, chloroplastic-like Neighboring gene calcium sensing receptor, chloroplastic-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteine biosynthetic process from serine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double fertilization forming a zygote and endosperm IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pollen tube growth IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cysteine synthase, chloroplastic/chromoplastic-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069078.1 Reference ASM2569848v2 Primary Assembly

    Range
    85977447..85982456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017755402.2 → XP_017610891.1  cysteine synthase, chloroplastic/chromoplastic-like

    UniProtKB/TrEMBL
    A0A0B0NFY6
    Conserved Domains (2) summary
    PLN02565
    Location:81 → 402
    PLN02565; cysteine synthase
    cl00342
    Location:1 → 401
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

RNA

  1. XR_008270622.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases