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LOC108454926 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like [ Gossypium arboreum ]

Gene ID: 108454926, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108454926
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108454926 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 9 NC_069078.1 (65479304..65489549, complement)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 11 NC_030674.1 (71294962..71301727, complement)

Chromosome 9 - NC_069078.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L32-1-like Neighboring gene small nucleolar RNA Z196/R39/R59 family Neighboring gene small nucleolar RNA F1/F2/snoR5a Neighboring gene AT-hook motif nuclear-localized protein 17-like Neighboring gene pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like Neighboring gene alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like Neighboring gene pentatricopeptide repeat-containing protein At5g46460, mitochondrial Neighboring gene alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069078.1 Reference ASM2569848v2 Primary Assembly

    Range
    65479304..65489549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017753560.2 → XP_017609049.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like

    UniProtKB/TrEMBL
    A0A0B0MKE8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases