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LOC108454191 hydroxyproline O-arabinosyltransferase NOD3-like [ Gossypium arboreum ]

Gene ID: 108454191, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108454191
Gene description
hydroxyproline O-arabinosyltransferase NOD3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium arboreum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC108454191 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 9 NC_069078.1 (72495142..72498777)
100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 11 NC_030674.1 (79257191..79260819)

Chromosome 9 - NC_069078.1Genomic Context describing neighboring genes Neighboring gene AT-hook motif nuclear-localized protein 22-like Neighboring gene ABC transporter G family member 23 Neighboring gene nonsense-mediated mRNA decay factor SMG7 Neighboring gene protein CLT1, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase NOD3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569848v2 Primary Assembly

Genomic

  1. NC_069078.1 Reference ASM2569848v2 Primary Assembly

    Range
    72495142..72498777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017752566.2 → XP_017608055.1  hydroxyproline O-arabinosyltransferase NOD3-like

    UniProtKB/TrEMBL
    A0A0B0NGD9

  2. XM_017752567.2 → XP_017608056.1  hydroxyproline O-arabinosyltransferase NOD3-like

    UniProtKB/TrEMBL
    A0A0B0NGD9
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases