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tars3 threonyl-tRNA synthetase 3 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108413626, updated on 18-Jun-2024

Summary

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Gene symbol
tars3
Gene description
threonyl-tRNA synthetase 3
See related
Ensembl:ENSPNAG00000015361
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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See tars3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 7 NC_051217.1 (41988929..42017090)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016245011.1 (42334..69222)

Chromosome 7 - NC_051217.1Genomic Context describing neighboring genes Neighboring gene growth arrest-specific protein 1 Neighboring gene unc-51 like kinase 3 Neighboring gene TM2 domain containing 3 Neighboring gene La ribonucleoprotein 6, translational regulator a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase 1, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051217.1 Reference fPygNat1.pri

    Range
    41988929..42017090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017686237.2 → XP_017541726.2  threonine--tRNA ligase 1, cytoplasmic

    UniProtKB/TrEMBL
    A0A3B4CG35
    Related
    ENSPNAP00000009846.2, ENSPNAT00000016308.2
    Conserved Domains (1) summary
    PLN02908
    Location:139 → 803
    PLN02908; threonyl-tRNA synthetase
Nucleotide Protein
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