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PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma [ Manis javanica (Malayan pangolin) ]

Gene ID: 108409981, updated on 14-Mar-2024

Summary

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Gene symbol
PIP4K2C
Gene description
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See PIP4K2C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436135.1 (28769476..28779144, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016547880.1 (49253..58262, complement)

NW_023436135.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene deltex E3 ubiquitin ligase 3 Neighboring gene kinesin family member 5A Neighboring gene dynactin subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436135.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    28769476..28779144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036992470.1 → XP_036848365.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X2

    Conserved Domains (1) summary
    cl28923
    Location:46 → 405
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  2. XM_017680842.2 → XP_017536331.2  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1

    Conserved Domains (1) summary
    cd17311
    Location:46 → 418
    PIPKc_PIP5K2C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma (PIP5K2C) and similar proteins
Nucleotide Protein
Heading Accession and Version

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