U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108409979, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
B4GALNT1
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B4GALNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436135.1 (28739323..28750067)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016547880.1 (18198..26828)

NW_023436135.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108387597 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene solute carrier family 26 member 10 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene deltex E3 ubiquitin ligase 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436135.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    28739323..28750067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036992024.1 → XP_036847919.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam00535
    Location:311 → 460
    Glycos_transf_2; Glycosyl transferase family 2

  2. XM_017680837.2 → XP_017536326.2  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam00535
    Location:311 → 460
    Glycos_transf_2; Glycosyl transferase family 2

  3. XM_017680838.2 → XP_017536327.2  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam00535
    Location:280 → 429
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.