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CRYBG1 crystallin beta-gamma domain containing 1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108409848, updated on 14-Mar-2024

Summary

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Gene symbol
CRYBG1
Gene description
crystallin beta-gamma domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Also known as
AIM1
Orthologs
human mouse all
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Genomic context

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See CRYBG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023435974.1 (4468102..4515712)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016547550.1 (221130..265375, complement)

NW_023435974.1Genomic Context describing neighboring genes Neighboring gene autophagy related 5 Neighboring gene uncharacterized LOC108409845 Neighboring gene reticulon 4 interacting protein 1 Neighboring gene glutaminyl-tRNA amidotransferase subunit QRSL1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta/gamma crystallin domain-containing protein 1
Names
absent in melanoma 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023435974.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    4468102..4515712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037012263.1 → XP_036868158.1  beta/gamma crystallin domain-containing protein 1

    Conserved Domains (4) summary
    PHA03247
    Location:20 → 501
    PHA03247; large tegument protein UL36; Provisional
    cd00161
    Location:1414 → 1542
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00030
    Location:1044 → 1137
    Crystall; Beta/Gamma crystallin
    cl02528
    Location:848 → 916
    Crystall; Beta/Gamma crystallin
Nucleotide Protein
Heading Accession and Version

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