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CPTP ceramide-1-phosphate transfer protein [ Manis javanica (Malayan pangolin) ]

Gene ID: 108408981, updated on 14-Mar-2024

Summary

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Gene symbol
CPTP
Gene description
ceramide-1-phosphate transfer protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See CPTP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436200.1 (15811835..15815871, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528202.1 (33692..39411, complement)

NW_023436200.1Genomic Context describing neighboring genes Neighboring gene dishevelled segment polarity protein 1 Neighboring gene taste 1 receptor member 3 Neighboring gene integrator complex subunit 11 Neighboring gene tRNA pseudouridine synthase-like 1 Neighboring gene pseudouridine synthase like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide 1-phosphate transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide-1-phosphate transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436200.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    15811835..15815871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036999700.1 → XP_036855595.1  ceramide-1-phosphate transfer protein

    Conserved Domains (1) summary
    pfam08718
    Location:30 → 173
    GLTP; Glycolipid transfer protein (GLTP)

  2. XM_036999699.1 → XP_036855594.1  ceramide-1-phosphate transfer protein

    Conserved Domains (1) summary
    pfam08718
    Location:30 → 173
    GLTP; Glycolipid transfer protein (GLTP)

  3. XM_017679289.2 → XP_017534778.1  ceramide-1-phosphate transfer protein

    Conserved Domains (1) summary
    pfam08718
    Location:30 → 173
    GLTP; Glycolipid transfer protein (GLTP)
Nucleotide Protein
Heading Accession and Version

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