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GPD1 glycerol-3-phosphate dehydrogenase 1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108406536, updated on 11-Apr-2024

Summary

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Gene symbol
GPD1
Gene description
glycerol-3-phosphate dehydrogenase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See GPD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436135.1 (32157654..32164853, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016542078.1 (37511..47171)

NW_023436135.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 5 Neighboring gene cytochrome c oxidase assembly protein COX14 Neighboring gene uncharacterized LOC118967285 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D1 Neighboring gene acid sensing ion channel subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADH oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol-3-phosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436135.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    32157654..32164853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036992439.1 → XP_036848334.1  glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X2

    Conserved Domains (1) summary
    TIGR03376
    Location:5 → 332
    glycerol3P_DH; glycerol-3-phosphate dehydrogenase (NAD(+))

  2. XM_017675278.2 → XP_017530767.1  glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X1

    Conserved Domains (1) summary
    TIGR03376
    Location:5 → 342
    glycerol3P_DH; glycerol-3-phosphate dehydrogenase (NAD(+))
Nucleotide Protein
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