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SUCLG2 succinate-CoA ligase GDP-forming subunit beta [ Manis javanica (Malayan pangolin) ]

Gene ID: 108405862, updated on 14-Mar-2024

Summary

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Gene symbol
SUCLG2
Gene description
succinate-CoA ligase GDP-forming subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See SUCLG2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436034.1 (12660356..12966778)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016541181.1 (12330..102312)

NW_023436034.1Genomic Context describing neighboring genes Neighboring gene TAFA chemokine like family member 4 Neighboring gene TAFA chemokine like family member 1 Neighboring gene uncharacterized LOC108394592 Neighboring gene small nucleolar RNA SNORA61 Neighboring gene uncharacterized LOC118972552 Neighboring gene uncharacterized LOC108406960 Neighboring gene kelch repeat and BTB domain containing 8 Neighboring gene uncharacterized LOC108396858

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436034.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    12660356..12966778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037019317.1 → XP_036875212.1  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X1

    Conserved Domains (1) summary
    PRK00696
    Location:39 → 445
    sucC; ADP-forming succinate--CoA ligase subunit beta

  2. XM_037019318.1 → XP_036875213.1  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X2

    Conserved Domains (1) summary
    PRK00696
    Location:39 → 420
    sucC; ADP-forming succinate--CoA ligase subunit beta
Nucleotide Protein
Heading Accession and Version

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