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ALDH3B1 aldehyde dehydrogenase 3 family member B1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108405835, updated on 14-Mar-2024

Summary

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Gene symbol
ALDH3B1
Gene description
aldehyde dehydrogenase 3 family member B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See ALDH3B1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436232.1 (437349..453963, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016541109.1 (158514..177066, complement)

NW_023436232.1Genomic Context describing neighboring genes Neighboring gene T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S8 Neighboring gene unc-93 homolog B1, TLR signaling regulator Neighboring gene protein unc-93 homolog B1-like Neighboring gene uncharacterized LOC118969120

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular aldehyde metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldehyde dehydrogenase family 3 member B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436232.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    437349..453963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037002482.1 → XP_036858377.1  aldehyde dehydrogenase family 3 member B1 isoform X1

    Conserved Domains (1) summary
    cl11961
    Location:6 → 372
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  2. XM_037002484.1 → XP_036858379.1  aldehyde dehydrogenase family 3 member B1 isoform X1

    Conserved Domains (1) summary
    cl11961
    Location:6 → 372
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  3. XM_037002483.1 → XP_036858378.1  aldehyde dehydrogenase family 3 member B1 isoform X1

    Conserved Domains (1) summary
    cl11961
    Location:6 → 372
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  4. XM_037002481.1 → XP_036858376.1  aldehyde dehydrogenase family 3 member B1 isoform X3

    Conserved Domains (1) summary
    cl11961
    Location:60 → 426
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  5. XM_037002480.1 → XP_036858375.1  aldehyde dehydrogenase family 3 member B1 isoform X1

    Conserved Domains (1) summary
    cl11961
    Location:6 → 372
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  6. XM_017674180.2 → XP_017529669.2  aldehyde dehydrogenase family 3 member B1 isoform X4

    Conserved Domains (1) summary
    cd07132
    Location:6 → 447
    ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

  7. XM_017674178.2 → XP_017529667.2  aldehyde dehydrogenase family 3 member B1 isoform X2

    Conserved Domains (1) summary
    cl11961
    Location:6 → 372
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  8. XM_017674187.2 → XP_017529676.2  aldehyde dehydrogenase family 3 member B1 isoform X5

    Conserved Domains (1) summary
    cl11961
    Location:6 → 372
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
Nucleotide Protein
Heading Accession and Version

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