U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COG8 component of oligomeric golgi complex 8 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108405301, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
COG8
Gene description
component of oligomeric golgi complex 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See COG8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436104.1 (4152062..4160898)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016540415.1 (44018..50485, complement)

NW_023436104.1Genomic Context describing neighboring genes Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene telomeric repeat binding factor 2 Neighboring gene uncharacterized LOC118973724 Neighboring gene transmembrane p24 trafficking protein 6 Neighboring gene vacuolar protein sorting 4 homolog A Neighboring gene syntrophin beta 2 Neighboring gene 60S ribosomal protein L26-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide deformylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
conserved oligomeric Golgi complex subunit 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436104.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    4152062..4160898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017673404.2 → XP_017528893.2  conserved oligomeric Golgi complex subunit 8 isoform X1

    Conserved Domains (1) summary
    pfam04124
    Location:56 → 394
    Dor1; Dor1-like family

  2. XM_037025450.1 → XP_036881345.1  conserved oligomeric Golgi complex subunit 8 isoform X2

    Conserved Domains (2) summary
    pfam04124
    Location:56 → 394
    Dor1; Dor1-like family
    cl00234
    Location:594 → 633
    Pep_deformylase; Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe(II) ...

  3. XM_037025451.1 → XP_036881346.1  conserved oligomeric Golgi complex subunit 8 isoform X3

    Conserved Domains (1) summary
    pfam04124
    Location:56 → 394
    Dor1; Dor1-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.