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TMED6 transmembrane p24 trafficking protein 6 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108405298, updated on 14-Mar-2024

Summary

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Gene symbol
TMED6
Gene description
transmembrane p24 trafficking protein 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See TMED6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436104.1 (4143191..4148968)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016540415.1 (53606..58514, complement)

NW_023436104.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 type B Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene telomeric repeat binding factor 2 Neighboring gene uncharacterized LOC118973724 Neighboring gene component of oligomeric golgi complex 8 Neighboring gene vacuolar protein sorting 4 homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436104.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    4143191..4148968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037025461.1 → XP_036881356.1  transmembrane emp24 domain-containing protein 6 isoform X4

    Conserved Domains (1) summary
    pfam01105
    Location:91 → 270
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. XM_037025458.1 → XP_036881353.1  transmembrane emp24 domain-containing protein 6 isoform X1

    Conserved Domains (1) summary
    pfam01105
    Location:69 → 266
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  3. XM_037025459.1 → XP_036881354.1  transmembrane emp24 domain-containing protein 6 isoform X2

    Conserved Domains (1) summary
    pfam01105
    Location:69 → 265
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  4. XM_037025462.1 → XP_036881357.1  transmembrane emp24 domain-containing protein 6 isoform X5

    Conserved Domains (1) summary
    pfam01105
    Location:43 → 211
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  5. XM_017673399.2 → XP_017528888.2  transmembrane emp24 domain-containing protein 6 isoform X3

    Conserved Domains (1) summary
    pfam01105
    Location:43 → 229
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
Heading Accession and Version

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