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LMAN2L lectin, mannose binding 2 like [ Manis javanica (Malayan pangolin) ]

Gene ID: 108404962, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436149.1 (2396206..2426173)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528030.1 (201550..226127)

NW_023436149.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 39 Neighboring gene ankyrin repeat domain 23 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436149.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    2396206..2426173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036994643.1 → XP_036850538.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:23 → 281
    lectin_L-type; legume lectins

  2. XM_017672854.2 → XP_017528343.1  VIP36-like protein isoform X4

  3. XM_017672867.2 → XP_017528356.1  VIP36-like protein isoform X5

  4. XM_017672826.2 → XP_017528315.1  VIP36-like protein isoform X1

  5. XM_017672835.2 → XP_017528324.1  VIP36-like protein isoform X2

Nucleotide Protein
Heading Accession and Version

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